PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN27030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 386aa    MW: 42769.1 Da    PI: 8.9296
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN27030.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.1e-052903271254
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 R +++ +++++L++l+ +      +K s a++L +A+ YI+ L
  KHN27030.1 290 RKEKLGDRIQTLQRLVAPF-----GKTSTASVLSEAIGYIHFL 327
                 7788999*********998.....8***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.585278327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.42E-5288332No hitNo description
SuperFamilySSF474591.96E-10288339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-7292335IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MEFASFHLQQ HQLQEESAQF SIISTTPPPD SKPSTTITNQ SWIPSNMYNG YNSGFLTDQS  60
FTNSRELQHK HAMTDSLRIS TRQAFGFNNG KSLITQHPVG DNNSLFPARI FKGEMIDNTF  120
MKAMEESSLV PIHHEPRYSS PSFLSSIGVT VGEEFYPNDK PIDGGTPSKR YNNSFGDVAL  180
ISNLPTLDMA SSLVSCSLGL NPKMFDLHTS YGGSCGIQPG YDTFGINESI SLSHSYEHGR  240
ENSPSNSTSK ISSFVSEVAT TKRPSNCSPP KESEAKAKKS RPSCPPLKVR KEKLGDRIQT  300
LQRLVAPFGK TSTASVLSEA IGYIHFLHQQ IQTLSIPYMK SAQSKPSRVV QLDSNKVDRR  360
EFKPDLRSRG LCLVPLSYAS FIHRCV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014624011.10.0PREDICTED: uncharacterized protein LOC100785177 isoform X2
TrEMBLA0A0B2QZS60.0A0A0B2QZS6_GLYSO; Transcription factor bHLH110
TrEMBLK7MH480.0K7MH48_SOYBN; Uncharacterized protein
STRINGGLYMA16G24661.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40453254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-36bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]